Ikatan Pelajar Muhammadiyah (IPM)
– Korps Fasilitator
– Korps Muballighat Mu’allimaat
– Mu’allimaat Entrepreneur Team (MET)
– Qur’an Squad

Lembaga IPM MTs Mu’allimaat
– Mu’allimaat Cadre of Muhammadiyah (M.Com)
– Komunitas Pelajar Kritis (KPK)
– Kreatif Dakwah Islam (KEDAI)
– Language Community (LC)

Dewan Kerabat Qabilah Fatmawati Hizbul Wathan
– Marching Band
– Pleton Inti
– Pasukan Inti (PASTI)

KIR ASGAMA (Association of Scientific Generation of Mu’allimaat)
– Ecology Community of Mu’allimaat (ECOM)

PMR Mosaic Unit 60
– Junior Red Cross (JRC)

LPPM (Lembaga Pers Pelita Mu’allimaat)
– Lembaga Pers (LP) Junior

Tapak Suci Mu’allimaat
– Tapak Suci MTs Junior (TSM)